Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | SAMN04488695_10348 | Not Available | Negative | 1432947 - 1433726 | 28825.7 |
| tyrosyl-trna synthetase | SAMN04488695_10349 | Not Available | Negative | 1433803 - 1434999 | 44965.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488695_10350 | Not Available | Positive | 1435734 - 1436246 | 18637.5 |
| protein of unknown function | SAMN04488695_10351 | Not Available | Positive | 1436288 - 1436683 | 15176.4 |
| helix-turn-helix | SAMN04488695_10352 | Not Available | Positive | 1436640 - 1437380 | 27777.9 |
| hypothetical protein | SAMN04488695_10353 | Not Available | Positive | 1437407 - 1437667 | 9949.02 |
| osmoprotectant transport system substrate-binding protein | SAMN04488695_10354 | Not Available | Positive | 1437730 - 1438677 | 34261.9 |
| osmoprotectant transport system permease protein | SAMN04488695_10355 | Not Available | Positive | 1438702 - 1439850 | 41529.0 |
| osmoprotectant transport system atp-binding protein | SAMN04488695_10356 | Not Available | Positive | 1439847 - 1440776 | 34602.5 |
| osmoprotectant transport system permease protein | SAMN04488695_10357 | Not Available | Positive | 1440763 - 1441491 | 25863.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.