Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine-phosphatase | SAMN04488695_10338 | Not Available | Positive | 1423489 - 1423881 | 14389.1 |
| aldo/keto reductase | SAMN04488695_10339 | Not Available | Negative | 1423975 - 1424811 | 31466.9 |
| methylglyoxal synthase | SAMN04488695_10340 | Not Available | Positive | 1424992 - 1425381 | 14269.5 |
| opine dehydrogenase | SAMN04488695_10341 | Not Available | Positive | 1425644 - 1426750 | 41313.7 |
| b12 binding domain-containing protein | SAMN04488695_10342 | Not Available | Positive | 1426747 - 1428390 | 62557.6 |
| phage shock protein pspc (stress-responsive transcriptional regulator) | SAMN04488695_10343 | Not Available | Negative | 1428481 - 1428684 | 7526.39 |
| hypothetical protein | SAMN04488695_10344 | Not Available | Positive | 1428871 - 1430616 | 66761.1 |
| hypothetical protein | SAMN04488695_10345 | Not Available | Negative | 1430656 - 1430907 | 9861.28 |
| predicted oxidoreductase | SAMN04488695_10346 | Not Available | Positive | 1431142 - 1432044 | 33965.8 |
| hypothetical protein | SAMN04488695_10347 | Not Available | Positive | 1432064 - 1432885 | 31017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.