Proteiniclasticum ruminis

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Proteiniclasticum

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusProteiniclasticum
SpeciesProteiniclasticum ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatantibiotic-contaminated sites adjacent to livestock facilities; sediment samples
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Proteiniclasticum ruminis strain ML2 genome assembly, contig:

Gene Summary

Adenine Count

890186 bp

Thymine Count

899943 bp

Guanine Count

677362 bp

Cytosine Count

705569 bp

Genome Length

3173070 bp

Protein-coding Genes

2909 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent rna helicase deadSAMN04488695_10328Not AvailablePositive1414873 - 141644759387.3
hypothetical proteinSAMN04488695_10329Not AvailablePositive1416719 - 14169137362.3
predicted dna-binding protein, mmcq/yjbr familySAMN04488695_10330Not AvailablePositive1417019 - 141737813843.9
dihydroxyacetone kinase dhak subunitSAMN04488695_10331Not AvailablePositive1417689 - 141868435272.8
dihydroxyacetone kinase dhal subunitSAMN04488695_10332Not AvailablePositive1418709 - 141933221336.7
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04488695_10333Not AvailableNegative1419423 - 141978813742.5
eama domain-containing membrane protein rardSAMN04488695_10334Not AvailableNegative1419865 - 142076432910.5
phosphoglycerate dehydrogenaseSAMN04488695_10335Not AvailablePositive1420936 - 142188335760.5
uncharacterized conserved protein ybjq, upf0145 familySAMN04488695_10336Not AvailableNegative1421966 - 142228611323.6
trna(ile)-lysidine synthase tils/mesjSAMN04488695_10337Not AvailablePositive1422516 - 142341234514.9

Displaying genes 1331 – 1340 of 3010 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.