Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN04488695_10318 | Not Available | Positive | 1405067 - 1405561 | 18817.1 |
| uncharacterized membrane protein ygae, upf0421/duf939 family | SAMN04488695_10319 | Not Available | Positive | 1405548 - 1406561 | 38518.9 |
| transposase inso and inactivated derivatives | SAMN04488695_10320 | Not Available | Negative | 1406601 - 1407449 | 32821.4 |
| hypothetical protein | SAMN04488695_10321 | Not Available | Negative | 1407515 - 1407934 | 16011.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488695_10322 | Not Available | Negative | 1408092 - 1408430 | 12881.6 |
| helix-turn-helix | SAMN04488695_10323 | Not Available | Positive | 1408586 - 1408792 | 7757.47 |
| 6-phosphogluconate dehydrogenase | SAMN04488695_10324 | Not Available | Positive | 1408961 - 1410409 | 53410.8 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN04488695_10325 | Not Available | Positive | 1410779 - 1412173 | 49202.2 |
| 6-phosphogluconolactonase | SAMN04488695_10326 | Not Available | Negative | 1412307 - 1413320 | 38485.4 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04488695_10327 | Not Available | Positive | 1413613 - 1414653 | 39353.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.