Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methylcytosine-specific restriction enzyme b | SAMN04488695_1038 | Not Available | Positive | 1392365 - 1394620 | 86133.9 |
| 5-methylcytosine-specific restriction enzyme subunit mcrc | SAMN04488695_1039 | Not Available | Positive | 1394617 - 1395858 | 48190.3 |
| protein of unknown function | SAMN04488695_10310 | Not Available | Positive | 1396127 - 1396720 | 21969.6 |
| protein of unknown function | SAMN04488695_10311 | Not Available | Positive | 1396717 - 1397349 | 23724.6 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04488695_10312 | Not Available | Negative | 1397458 - 1397856 | 15136.2 |
| tolb protein | SAMN04488695_10313 | Not Available | Negative | 1398121 - 1399224 | 39757.1 |
| signal transduction histidine kinase | SAMN04488695_10314 | Not Available | Negative | 1399335 - 1400801 | 55626.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488695_10315 | Not Available | Negative | 1400798 - 1401490 | 26157.1 |
| dna-binding transcriptional regulator, merr family | SAMN04488695_10316 | Not Available | Positive | 1401761 - 1402996 | 47427.8 |
| fumarate reductase flavoprotein subunit | SAMN04488695_10317 | Not Available | Positive | 1403159 - 1404955 | 64181.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.