Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488695_102308 | Not Available | Positive | 1283991 - 1285352 | 52526.5 |
| predicted dehydrogenase | SAMN04488695_102309 | Not Available | Positive | 1285570 - 1286520 | 36000.4 |
| hypothetical protein | SAMN04488695_102310 | Not Available | Positive | 1286642 - 1286983 | 12989.4 |
| phosphoglycerol transferase | SAMN04488695_102311 | Not Available | Positive | 1287006 - 1288457 | 55402.8 |
| 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis | SAMN04488695_102312 | Not Available | Positive | 1288578 - 1289162 | 21492.8 |
| exonuclease recj | SAMN04488695_102313 | Not Available | Positive | 1289327 - 1291084 | 65811.5 |
| sortase a | SAMN04488695_102314 | Not Available | Negative | 1291401 - 1292099 | 26001.2 |
| cell envelope-related function transcriptional attenuator common domain-containing protein | SAMN04488695_102315 | Not Available | Negative | 1292280 - 1293296 | 37718.4 |
| nad-dependent deacetylase | SAMN04488695_102316 | Not Available | Negative | 1293447 - 1294169 | 26847.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488695_102317 | Not Available | Negative | 1294311 - 1294895 | 22859.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.