Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488695_102258 | Not Available | Positive | 1225491 - 1226045 | 21844.2 |
| hypothetical protein | SAMN04488695_102259 | Not Available | Positive | 1226042 - 1227262 | 46955.9 |
| pyrophosphatase ppax | SAMN04488695_102260 | Not Available | Positive | 1227488 - 1228147 | 24710.6 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04488695_102261 | Not Available | Negative | 1228228 - 1230042 | 69443.2 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488695_102262 | Not Available | Negative | 1230170 - 1231486 | 49170.7 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488695_102263 | Not Available | Positive | 1231745 - 1232293 | 20905.9 |
| hypothetical protein | SAMN04488695_102264 | Not Available | Positive | 1232280 - 1233440 | 42858.1 |
| hypothetical protein | SAMN04488695_102265 | Not Available | Positive | 1233621 - 1233857 | 8602.3 |
| deoxyadenosine/deoxycytidine kinase | SAMN04488695_102266 | Not Available | Positive | 1234022 - 1234654 | 24812.9 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04488695_102267 | Not Available | Positive | 1235125 - 1236678 | 57509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.