Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04488695_102248 | Not Available | Negative | 1215878 - 1216849 | 35701.0 |
| glutaredoxin-like protein, yrub-family | SAMN04488695_102249 | Not Available | Positive | 1217054 - 1217287 | 8876.89 |
| ghkl domain-containing protein | SAMN04488695_102250 | Not Available | Negative | 1217685 - 1218974 | 49287.6 |
| dna-binding response regulator, lytr/algr family | SAMN04488695_102251 | Not Available | Negative | 1218971 - 1219687 | 27706.6 |
| hypothetical protein | SAMN04488695_102252 | Not Available | Positive | 1219996 - 1220295 | 11007.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04488695_102253 | Not Available | Positive | 1221129 - 1221941 | 29372.1 |
| amino acid abc transporter membrane protein, paat family | SAMN04488695_102254 | Not Available | Positive | 1221971 - 1222630 | 24668.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN04488695_102255 | Not Available | Positive | 1222649 - 1223401 | 27780.1 |
| ribonuclease bn, trna processing enzyme | SAMN04488695_102256 | Not Available | Positive | 1223540 - 1224268 | 27594.4 |
| tetratricopeptide repeat-containing protein | SAMN04488695_102257 | Not Available | Negative | 1224340 - 1225284 | 36453.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.