Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488695_102238 | Not Available | Positive | 1202236 - 1202907 | 26064.6 |
| signal transduction histidine kinase | SAMN04488695_102239 | Not Available | Positive | 1202916 - 1204268 | 50614.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488695_102240 | Not Available | Positive | 1204426 - 1206378 | 75367.5 |
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN04488695_102241 | Not Available | Positive | 1206359 - 1207480 | 44163.8 |
| hypothetical protein | SAMN04488695_102242 | Not Available | Negative | 1207533 - 1208057 | 20740.4 |
| hypothetical protein | SAMN04488695_102243 | Not Available | Negative | 1208303 - 1208500 | 7436.68 |
| hypothetical protein | SAMN04488695_102244 | Not Available | Positive | 1208656 - 1209513 | 33245.1 |
| ca-activated chloride channel family protein | SAMN04488695_102245 | Not Available | Positive | 1209935 - 1212328 | 91754.2 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN04488695_102246 | Not Available | Positive | 1212793 - 1215213 | 91479.5 |
| biotin transport system substrate-specific component | SAMN04488695_102247 | Not Available | Negative | 1215309 - 1215881 | 20332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.