Thioalkalivibrio sp. K90mix

Gram-negativeRodMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio sp. (strain K90mix) is an extremely salt tolerant (haloalkaliphilic), chemolithoautotrophic, sulfur-oxidizing Gram-negative bacterium isolated from a mixture of soda lake sediments. Thioalkalivibrio sp. uses CO2 as a carbon source and reduced sulfur compounds as an energy source. It has a pH optimum of 10 and can grow at salinities up to 4.3M of sodium and 3.6M of potassium. Thioalkalivibrio sp. can be used to remove noxious sulfur compounds from waste streams and energy carriers (bioremediation and carbon sequestration). (Adapted from: http://genome.jgi-psf.org/thi_k/thi_k.home.html). (EBI Integr8)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Chromatiales
Family	Ectothiorhodospiraceae
Genus	Thioalkalivibrio
Species	Thioalkalivibrio sp. K90mix
Strain	K90mix

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	2

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobic
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Chemolithoautotroph
Pathogenicity	No

Genome Summary

Thioalkalivibrio sp. K90mix

NC_013930.1 NC_013889.1

Gene Summary

Adenine Count

48374 bp

Thymine Count

43540 bp

Guanine Count

76899 bp

Cytosine Count

71443 bp

Genome Length

240256 bp

Protein-coding Genes

276 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	TK90_RS13355	Not Available	Positive	30513 - 30776	9745.67
hypothetical protein	TK90_RS13360	Not Available	Negative	30824 - 31753	35472.6
duf4031 domain-containing protein	TK90_RS13365	Not Available	Positive	32027 - 32233	8037.72
hypothetical protein	TK90_RS13370	Not Available	Positive	32244 - 32675	15936.2
hypothetical protein	TK90_RS14925	Not Available	Negative	32802 - 34022	44806.9
hypothetical protein	TK90_RS13375	Not Available	Positive	34192 - 34545	12740.7
uracil-dna glycosylase	TK90_RS13380	Q96YD0	Positive	34542 - 35159	22309.7
hypothetical protein	TK90_RS13385	Not Available	Positive	35249 - 35662	15691.5
hypothetical protein	TK90_RS13390	Not Available	Positive	35741 - 36334	21969.9
hypothetical protein	TK90_RS13395	Not Available	Positive	36362 - 36823	16789.4

Displaying genes 51 – 60 of 2925 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000253	2-oxopent-4-enoateC5H5O3		Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5		Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000553	biphenyl-2,3-diolC12H10O2		Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O		Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000989	GlycerolC3H8O3		`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da
BASm0001225	dodecanoateC12H23O2		Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001639	CobinamideC48H72CoN11O8		`13497-85-3`	Average990.0874Da Monoisotopic989.4897335Da
BASm0001661	Cu(2+)Cu		`7440-50-8`	Average63.546Da Monoisotopic62.929601079Da
BASm0001696	2-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2		Not available	Average259.349Da Monoisotopic259.15722892Da
BASm0001808	corynebactinC39H42N6O18		Not available	Average882.789Da Monoisotopic882.2555585Da

Displaying 1–10 of 1630 metabolites

Health Effects

No health effects information available for this bacterium.