Methylophaga thiooxydans

Gram-negativerodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Methylophaga

Description

Methylophaga thiooxydans is a gram-negative, rod-shaped microbe that thrives in mesophilic temperatures, categorized as a chemoautotroph, and can be found in various body sites, including soil, sediment, and aquatic environments, across all possible species. As a chemoautotroph, Methylophaga thiooxydans derives its energy from chemical reactions, specifically the oxidation of sulfur compounds, and can synthesize its own organic compounds from carbon dioxide. This microbe is an obligate aerobe, requiring oxygen to survive and grow, which is evident in its ability to thrive in environments with high oxygen levels. The gram-negative cell wall of Methylophaga thiooxydans provides it with a degree of resistance to environmental stresses, while its rod-shaped morphology allows for efficient movement and colonization of new environments. The mesophilic temperature preference of this microbe enables it to thrive in a wide range of environments, from aquatic ecosystems to soil and sediment. As a chemoautotroph, Methylophaga thiooxydans plays a crucial role in the sulfur cycle, contributing to the oxidation of sulfur compounds and the formation of sulfate. Methylophaga thiooxydans has been found to have a unique ability to oxidize dimethyl sulfide, a volatile organic compound, which contributes to the formation of acidic rain and has implications for climate regulation. This microbe's ability to thrive in diverse environments and its role in the sulfur cycle make it a significant component of many ecosystems, and its study has led to a greater understanding of the complex interactions between microorganisms and their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusMethylophaga
SpeciesMethylophaga thiooxydans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Methylophaga thiooxydans
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithotroph
PathogenicityNot Available

Genome Summary

Methylophaga thiooxydans isolate L4 contig008, whole genome

Gene Summary

Adenine Count

703267 bp

Thymine Count

702872 bp

Guanine Count

589325 bp

Cytosine Count

594189 bp

Genome Length

2589653 bp

Protein-coding Genes

2521 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly(a) polymeraseLP43_2545Not AvailableNegative2571315 - 257268552241.9
ribonuclease hiiLP43_2546Not AvailableNegative2572815 - 257338720571.1
lipid-a-disaccharide synthaseLP43_2547Not AvailableNegative2573387 - 257453242034.8
3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase iiLP43_2548Not AvailableNegative2574529 - 257564740663.6
riboflavin synthase eubacterial/eukaryoticLP43_2549Not AvailableNegative2575649 - 257628722818.4
diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductaseLP43_2550Not AvailableNegative2576291 - 257739740144.8
ribonucleotide reductase transcriptional regulator nrdrLP43_2551Not AvailableNegative2577502 - 257796918165.6
serine hydroxymethyltransferaseLP43_2552Not AvailableNegative2577983 - 257922144233.5
2-hydroxy-3-oxopropionate reductaseLP43_2553Not AvailablePositive2579346 - 258020930949.7
adenylosuccinate synthetaseLP43_2554Not AvailableNegative2580240 - 258153546683.2

Displaying genes 2541 – 2550 of 2559 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.