Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Oscillatoriales
Family
Microcoleaceae
Genus
Planktothrix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Oscillatoriales |
| Family | Microcoleaceae |
| Genus | Planktothrix |
| Species | Planktothrix agardhii |
| Strain | NIVA-CYA 126/8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planktothrix agardhii NIVA-CYA 126/8 plasmid pPA115, whole genome
Gene Summary
Adenine Count
36673 bp
Thymine Count
36571 bp
Guanine Count
23998 bp
Cytosine Count
22327 bp
Genome Length
119569 bp
Protein-coding Genes
106 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 4290087 - 4291589 | Not Available |
| m16 family metallopeptidase | A19Y_RS18725 | Not Available | Negative | 4292256 - 4293548 | 47972.8 |
| trna 2-thiouridine(34) synthase mnma | A19Y_RS18730 | Not Available | Negative | 4293739 - 4294827 | 39891.9 |
| spor domain-containing protein | A19Y_RS18735 | Not Available | Positive | 4294964 - 4295935 | 35346.6 |
| glycosyltransferase family 39 protein | A19Y_RS18740 | Not Available | Negative | 4296252 - 4297931 | 64412.8 |
| hypothetical protein | A19Y_RS25270 | Not Available | Positive | 4297939 - 4298094 | 5814.31 |
| peptide chain release factor 2 | A19Y_RS18745 | Not Available | Positive | 4298020 - 4299142 | 42252.2 |
| caspase family protein | A19Y_RS18750 | Not Available | Positive | 4299195 - 4300469 | 46729.8 |
| tir domain-containing protein | A19Y_RS18755 | Not Available | Positive | 4300587 - 4304552 | 147733.0 |
| c1 family peptidase | A19Y_RS22555 | Not Available | Positive | 4304707 - 4307397 | 104354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
