Planktothrix agardhii NIVA-CYA 126/8

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Taxonomy

Kingdom	Bacillati
Phylum	Cyanobacteriota
Class	Cyanophyceae
Order	Oscillatoriales
Family	Microcoleaceae
Genus	Planktothrix
Species	Planktothrix agardhii
Strain	NIVA-CYA 126/8

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Planktothrix agardhii NIVA-CYA 126/8 plasmid pPA115, whole genome

NZ_CM002804.1 NZ_CM002805.1 NZ_CM002803.1 NZ_CM002807.1 NZ_CM002806.1 NZ_CM002808.1 ASAK00000000.1

Gene Summary

Adenine Count

36673 bp

Thymine Count

36571 bp

Guanine Count

23998 bp

Cytosine Count

22327 bp

Genome Length

119569 bp

Protein-coding Genes

106 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
single-stranded dna-binding protein	A19Y_RS23540	Not Available	Positive	4051496 - 4052104	22971.3
rna recognition motif domain-containing protein	A19Y_RS17705	Not Available	Positive	4052562 - 4052873	11734.6
rna recognition motif domain-containing protein	A19Y_RS17710	Not Available	Positive	4053244 - 4053588	12139.2
rna recognition motif domain-containing protein	A19Y_RS17715	Not Available	Positive	4053974 - 4054306	11780.6
tigr02921 family pep-cterm protein	A19Y_RS17720	Not Available	Positive	4054636 - 4057455	106978.0
hypothetical protein	A19Y_RS17725	Not Available	Negative	4057494 - 4058156	24833.4
uma2 family endonuclease	A19Y_RS17730	Not Available	Positive	4058366 - 4058980	23412.0
dead/deah box helicase family protein	A19Y_RS17735	Not Available	Negative	4059005 - 4061878	111088.0
duf4145 domain-containing protein	A19Y_RS26130	Not Available	Negative	4061899 - 4062543	24899.7
type ii toxin-antitoxin system vapc family toxin	A19Y_RS17740	Not Available	Negative	4062640 - 4063053	16129.0

Displaying genes 3781 – 3790 of 4565 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000277	keto-L-sorboseC6H12O6	Not available	Average180.1559Da Monoisotopic180.0633881Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0001279	(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6	Not available	Average457.4399Da Monoisotopic457.1709815Da
BASm0001330	N-acetyl-D-hexosamineC8H15NO6	Not available	Average221.209Da Monoisotopic221.089937207Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001779	orotateC5H3N2O4	Not available	Average155.09Da Monoisotopic155.0098302Da
BASm0001786	(S,S)-tartrateC4H4O6	Not available	Average148.071Da Monoisotopic148.001885Da
BASm0001789	(3R)-citramalateC5H6O5	Not available	Average146.099Da Monoisotopic146.0226205Da

Displaying 1–10 of 32 metabolites

Health Effects

No health effects information available for this bacterium.