Planktothrix agardhii NIVA-CYA 126/8

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Taxonomy

Kingdom	Bacillati
Phylum	Cyanobacteriota
Class	Cyanophyceae
Order	Oscillatoriales
Family	Microcoleaceae
Genus	Planktothrix
Species	Planktothrix agardhii
Strain	NIVA-CYA 126/8

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Planktothrix agardhii NIVA-CYA 126/8 plasmid pPA115, whole genome

NZ_CM002804.1 NZ_CM002805.1 NZ_CM002803.1 NZ_CM002807.1 NZ_CM002806.1 NZ_CM002808.1 ASAK00000000.1

Gene Summary

Adenine Count

36673 bp

Thymine Count

36571 bp

Guanine Count

23998 bp

Cytosine Count

22327 bp

Genome Length

119569 bp

Protein-coding Genes

106 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
gun4 domain-containing protein	A19Y_RS11910	Not Available	Positive	2739922 - 2741592	65792.9
helix-turn-helix domain-containing protein	A19Y_RS23250	Not Available	Positive	2741723 - 2741881	6027.26
n-acetylmuramic acid 6-phosphate etherase	A19Y_RS11915	Not Available	Negative	2741942 - 2742862	32877.8
duf3110 domain-containing protein	A19Y_RS11920	Not Available	Negative	2742901 - 2743287	14636.8
class i sam-dependent methyltransferase	A19Y_RS11925	Not Available	Positive	2743433 - 2744560	42646.5
calcium-binding protein	A19Y_RS11930	Not Available	Positive	2744789 - 2745580	27448.5
rpn family recombination-promoting nuclease/putative transposase	A19Y_RS11935	Not Available	Negative	2745700 - 2746623	35147.5
bifunctional udp-sugar hydrolase/5'-nucleotidase	A19Y_RS11940	Not Available	Negative	2746818 - 2748287	54735.1
hypothetical protein	A19Y_RS11945	Not Available	Negative	2748424 - 2749002	22138.2
tetratricopeptide repeat protein	A19Y_RS11950	Not Available	Negative	2749016 - 2750389	52005.7

Displaying genes 2571 – 2580 of 4565 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000277	keto-L-sorboseC6H12O6	Not available	Average180.1559Da Monoisotopic180.0633881Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0001279	(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6	Not available	Average457.4399Da Monoisotopic457.1709815Da
BASm0001330	N-acetyl-D-hexosamineC8H15NO6	Not available	Average221.209Da Monoisotopic221.089937207Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001779	orotateC5H3N2O4	Not available	Average155.09Da Monoisotopic155.0098302Da
BASm0001786	(S,S)-tartrateC4H4O6	Not available	Average148.071Da Monoisotopic148.001885Da
BASm0001789	(3R)-citramalateC5H6O5	Not available	Average146.099Da Monoisotopic146.0226205Da

Displaying 1–10 of 32 metabolites

Health Effects

No health effects information available for this bacterium.