Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Oscillatoriales
Family
Microcoleaceae
Genus
Planktothrix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Oscillatoriales |
| Family | Microcoleaceae |
| Genus | Planktothrix |
| Species | Planktothrix agardhii |
| Strain | NIVA-CYA 126/8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planktothrix agardhii NIVA-CYA 126/8 plasmid pPA115, whole genome
Gene Summary
Adenine Count
36673 bp
Thymine Count
36571 bp
Guanine Count
23998 bp
Cytosine Count
22327 bp
Genome Length
119569 bp
Protein-coding Genes
106 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | A19Y_RS10555 | Not Available | Negative | 2428270 - 2429124 | 32546.9 |
| hypothetical protein | A19Y_RS10560 | Not Available | Negative | 2429236 - 2429559 | 12149.4 |
| b12-binding domain-containing radical sam protein | A19Y_RS10565 | Not Available | Negative | 2429618 - 2431168 | 58925.5 |
| glycosyl transferase | A19Y_RS10570 | Not Available | Positive | 2431302 - 2432414 | 41869.4 |
| secondary thiamine-phosphate synthase enzyme yjbq | A19Y_RS10575 | Not Available | Positive | 2432467 - 2432883 | 15708.6 |
| hypothetical protein | A19Y_RS10580 | Not Available | Negative | 2432892 - 2433680 | 28397.2 |
| ribonuclease r family protein | A19Y_RS10585 | Not Available | Positive | 2434117 - 2436411 | 85942.9 |
| abc transporter permease | A19Y_RS10590 | Not Available | Positive | 2436508 - 2437212 | 26169.3 |
| shikimate kinase | A19Y_RS10595 | Not Available | Positive | 2437290 - 2437841 | 20796.5 |
| nudix hydrolase | A19Y_RS10600 | Not Available | Positive | 2437889 - 2438323 | 16766.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
