Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Oscillatoriales
Family
Microcoleaceae
Genus
Planktothrix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Oscillatoriales |
| Family | Microcoleaceae |
| Genus | Planktothrix |
| Species | Planktothrix agardhii |
| Strain | NIVA-CYA 126/8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planktothrix agardhii NIVA-CYA 126/8 plasmid pPA115, whole genome
Gene Summary
Adenine Count
36673 bp
Thymine Count
36571 bp
Guanine Count
23998 bp
Cytosine Count
22327 bp
Genome Length
119569 bp
Protein-coding Genes
106 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | A19Y_RS08975 | Not Available | Positive | 1996973 - 1998319 | 50493.0 |
| duf3122 domain-containing protein | A19Y_RS08980 | Not Available | Positive | 1998401 - 1998916 | 19466.0 |
| shikimate dehydrogenase | A19Y_RS08985 | Not Available | Positive | 1998913 - 1999776 | 31159.1 |
| hypothetical protein | A19Y_RS08990 | Not Available | Positive | 1999789 - 2000220 | 15820.2 |
| serine/threonine-protein kinase | A19Y_RS08995 | Not Available | Negative | 2000227 - 2002416 | 82242.6 |
| acetate--coa ligase | A19Y_RS09000 | Not Available | Positive | 2002531 - 2004498 | 73333.3 |
| uma2 family endonuclease | A19Y_RS09005 | Not Available | Negative | 2004810 - 2005385 | 21288.9 |
| thermonuclease family protein | A19Y_RS09010 | Not Available | Positive | 2005640 - 2006590 | 36564.8 |
| nadph-dependent fmn reductase | A19Y_RS09015 | Not Available | Positive | 2006604 - 2007185 | 20724.1 |
| hypothetical protein | A19Y_RS09020 | Not Available | Positive | 2007290 - 2007667 | 13786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
