Planktothrix agardhii NIVA-CYA 126/8

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Taxonomy

Kingdom	Bacillati
Phylum	Cyanobacteriota
Class	Cyanophyceae
Order	Oscillatoriales
Family	Microcoleaceae
Genus	Planktothrix
Species	Planktothrix agardhii
Strain	NIVA-CYA 126/8

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Planktothrix agardhii NIVA-CYA 126/8 plasmid pPA115, whole genome

NZ_CM002804.1 NZ_CM002805.1 NZ_CM002803.1 NZ_CM002807.1 NZ_CM002806.1 NZ_CM002808.1 ASAK00000000.1

Gene Summary

Adenine Count

36673 bp

Thymine Count

36571 bp

Guanine Count

23998 bp

Cytosine Count

22327 bp

Genome Length

119569 bp

Protein-coding Genes

106 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
n-acetylglucosamine-6-phosphate deacetylase	A19Y_RS08745	Not Available	Negative	1945511 - 1946788	46147.0
5-(carboxyamino)imidazole ribonucleotide mutase	A19Y_RS08750	Not Available	Positive	1946855 - 1947334	16941.6
hypothetical protein	A19Y_RS08755	Not Available	Positive	1947525 - 1948136	23363.0
glycoside hydrolase family protein	A19Y_RS08760	Not Available	Negative	1948158 - 1948859	27294.7
nad(p)h-binding protein	A19Y_RS08765	Not Available	Negative	1948859 - 1949521	24283.2
duf1997 domain-containing protein	A19Y_RS08770	Not Available	Positive	1949654 - 1950355	26105.1
cmpa/nrta family abc transporter substrate-binding protein	A19Y_RS08775	Not Available	Positive	1950804 - 1952177	49991.5
nitrate abc transporter permease	A19Y_RS08780	Not Available	Positive	1952229 - 1953077	31103.5
nitrate abc transporter atp-binding protein	A19Y_RS08785	Not Available	Positive	1953136 - 1955142	74476.5
nitrate abc transporter atp-binding protein	A19Y_RS08790	Not Available	Positive	1955213 - 1956067	31935.8

Displaying genes 1911 – 1920 of 4565 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000277	keto-L-sorboseC6H12O6	Not available	Average180.1559Da Monoisotopic180.0633881Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0001279	(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6	Not available	Average457.4399Da Monoisotopic457.1709815Da
BASm0001330	N-acetyl-D-hexosamineC8H15NO6	Not available	Average221.209Da Monoisotopic221.089937207Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001779	orotateC5H3N2O4	Not available	Average155.09Da Monoisotopic155.0098302Da
BASm0001786	(S,S)-tartrateC4H4O6	Not available	Average148.071Da Monoisotopic148.001885Da
BASm0001789	(3R)-citramalateC5H6O5	Not available	Average146.099Da Monoisotopic146.0226205Da

Displaying 1–10 of 32 metabolites

Health Effects

No health effects information available for this bacterium.