Pseudomonas protegens

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas protegens is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobic heterotroph, utilizing organic compounds for energy. This versatile microbe thrives optimally at a temperature of 25.0 degrees Celsius and is found in a variety of habitats, suggesting its adaptability to diverse environmental conditions. Pseudomonas protegens is recognized for its metabolic versatility, allowing it to exploit a wide range of organic substrates, which may contribute to its ecological success in various niches, including soil and water environments. The bacterium’s aerobic nature indicates a reliance on oxygen for respiration, which may influence its distribution in environments with varying levels of oxygen availability. The ability of Pseudomonas protegens to thrive in multiple habitats highlights its potential role in biogeochemical cycles and its interactions within microbial communities. Notably, this species has been studied for its potential applications in biocontrol, suggesting an ecological role in suppressing plant pathogens and influencing plant health. Thus, understanding the traits of Pseudomonas protegens contributes to insights into its ecological significance and possible applications in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas protegens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas protegens
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Craugastor crassidigitus
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas protegens strain 14B2 14B2_NODE_309, whole genome

Gene Summary

Adenine Count

1353682 bp

Thymine Count

1369817 bp

Guanine Count

2253225 bp

Cytosine Count

2211833 bp

Genome Length

7226270 bp

Protein-coding Genes

5709 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
faga proteinBLX41_26630Not AvailablePositive5939122 - 593951715391.5
aspartate ammonia-lyaseBLX41_26635Not AvailablePositive5939510 - 594088648751.2
hypothetical proteinBLX41_26640Not AvailablePositive5940914 - 594136316881.9
superoxide dismutaseBLX41_26645Not AvailablePositive5941365 - 594197622638.6
zip family metal transporterBLX41_26650Not AvailablePositive5942010 - 594290330125.0
phosphocarrier protein hprBLX41_26655Not AvailableNegative5942933 - 59432059688.88
rnase adaptor protein rapzBLX41_26660Not AvailableNegative5943222 - 594407932062.5
pts iia-like nitrogen-regulatory protein ptsnBLX41_26665Not AvailableNegative5944082 - 594454616827.4
ribosomal subunit interface proteinBLX41_26670Not AvailableNegative5944559 - 594486411590.0
rna polymerase factor sigma-54BLX41_26675Not AvailableNegative5944944 - 594643756578.8

Displaying genes 4921 – 4930 of 5859 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.