Haemophilus influenzae R3021

Gram-negativeRodNon-motileAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Haemophilus

Description

Haemophilus influenzae R3021 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments, exhibiting optimal growth at 35.0°C. This microbe is classified as an aerobe and is also capable of facultative anaerobic respiration, allowing it to adapt to varying oxygen levels within its ecological niches. As a member of the genus Haemophilus, H. influenzae R3021 shares characteristics with other species in this group, known for their association with various host organisms. The bacterium's rod shape and Gram-negative cell wall structure are indicative of its potential roles in microbial communities, particularly within the respiratory tract of hosts. The ability to grow in both aerobic and anaerobic conditions suggests that H. influenzae R3021 may occupy diverse microenvironments within its host, potentially affecting its interactions with other microbial species. This versatility may facilitate its survival and persistence in dynamic ecological niches, where fluctuations in oxygen availability can occur. Further investigations into the specific ecological roles and interactions of H. influenzae R3021 could provide insights into the broader implications of its presence in host-associated microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHaemophilus
SpeciesHaemophilus influenzae
StrainR3021

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Haemophilus influenzae R3021
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Haemophilus influenzae R3021 ctg17, whole genome shotgun sequence.

Gene Summary

Adenine Count

576769 bp

Thymine Count

586942 bp

Guanine Count

362088 bp

Cytosine Count

349814 bp

Genome Length

1875614 bp

Protein-coding Genes

2021 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iCGSHi22421_05023Not AvailableNegative614074 - 61630683164.6
cystathionine beta-lyaseCGSHi22421_01659Not AvailablePositive616546 - 61765540486.4
d-lactate dehydrogenaseCGSHi22421_01664Not AvailablePositive617668 - 61866337089.0
thioredoxinCGSHi22421_01669Not AvailablePositive618783 - 61910611640.2
hypothetical proteinCGSHi22421_01674Not AvailableNegative619103 - 61941111583.0
hypothetical proteinCGSHi22421_01679Not AvailableNegative619387 - 6196539732.89
hypothetical proteinCGSHi22421_01684Not AvailableNegative619701 - 6197993949.72
putative deoxyribonucleaseCGSHi22421_01689Not AvailableNegative619910 - 62069829721.8
hypothetical proteinCGSHi22421_01694Not AvailableNegative620753 - 62126218992.6
cysteinyl-trna synthetaseCGSHi22421_01699Not AvailablePositive621365 - 62247442704.1

Displaying genes 791 – 800 of 2149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

323 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 323 metabolites

Health Effects

No health effects information available for this bacterium.