Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas citri |
| Strain | pv. fuscans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | bean field; bean leaf |
| Biotic relationship | Not Available |
| Host(s) | Phaseolus vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xanthomonas citri pv. fuscans strain ISO12C3 chromosome, complete
Gene Summary
Adenine Count
938897 bp
Thymine Count
939248 bp
Guanine Count
1716288 bp
Cytosine Count
1717894 bp
Genome Length
5312327 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | AC612_RS04645 | Not Available | Negative | 1028915 - 1029886 | 33749.3 |
| peptidylprolyl isomerase | AC612_RS04650 | Not Available | Negative | 1029906 - 1031297 | 50116.8 |
| lps-assembly protein lptd | AC612_RS04655 | Not Available | Negative | 1031294 - 1033744 | 92537.9 |
| hypothetical protein | AC612_RS04660 | Not Available | Negative | 1033861 - 1034034 | 6256.48 |
| hypothetical protein | AC612_RS24300 | Not Available | Negative | 1034748 - 1034894 | 5316.37 |
| is5 family transposase | AC612_RS04670 | Not Available | Negative | 1034891 - 1035988 | 40764.8 |
| histone deacetylase family protein | AC612_RS04680 | Not Available | Negative | 1036232 - 1037179 | 34490.2 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | AC612_RS04685 | Not Available | Negative | 1037218 - 1037775 | 19865.7 |
| hypothetical protein | AC612_RS04690 | Not Available | Negative | 1037779 - 1038357 | 21042.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1038486 - 1038563 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Common bacterial blight of beans | Causes | PMC8042644 |
| Common bacterial blight | Causes | PMC7437933 |
| Cbb | Causes | PMC7437933 |
| Common bacterial blight of bean | Causes | PMC7437933 |