Granulibacter bethesdensis str. NIH6.1

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Granulibacter

Description

Granulibacter bethesdensis strain NIH6.1 is a Gram-negative, rod-shaped bacterium that has been isolated from a variety of habitats. This microbe exhibits characteristics typical of its genus, contributing to its classification within the broader context of bacterial diversity. The Gram-negative nature of G. bethesdensis suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a role in its environmental adaptability and interactions with other microorganisms. The versatile habitat of Granulibacter bethesdensis indicates its potential for niche specialization, allowing it to thrive in diverse environments. Such adaptability may be linked to specific metabolic capabilities or symbiotic relationships with other microbial or host organisms. As research continues, understanding the physiological and ecological roles of G. bethesdensis in its various habitats could provide insights into its interactions within microbial communities and its responses to environmental changes. Overall, the presence of Granulibacter bethesdensis str. NIH6.1 across multiple habitats highlights the significance of this bacterium in ecological research and its potential contributions to microbial diversity and ecosystem functioning. Further investigation into its metabolic pathways and interactions may reveal novel biological functions that underscore its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusGranulibacter
SpeciesGranulibacter bethesdensis
StrainNIH6.1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Granulibacter bethesdensis str. NIH6.1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Granulibacter bethesdensis strain NIH6.1 chromosome, complete

Gene Summary

Adenine Count

559780 bp

Thymine Count

555538 bp

Guanine Count

785610 bp

Cytosine Count

789813 bp

Genome Length

2690741 bp

Protein-coding Genes

2359 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ppx/gppa phosphatase family proteinGbCGDNIH6_RS05915Not AvailablePositive1292442 - 129356940303.9
rlme family rna methyltransferaseGbCGDNIH6_RS05920Not AvailablePositive1293583 - 129427524533.7
imp dehydrogenaseGbCGDNIH6_RS05925Not AvailablePositive1294411 - 129593153558.4
rsmb/nop family class i sam-dependent rna methyltransferaseGbCGDNIH6_RS05930Not AvailablePositive1295966 - 129725247219.9
gnat family n-acetyltransferaseGbCGDNIH6_RS05935Not AvailablePositive1297249 - 129786021691.2
glutamine-hydrolyzing gmp synthaseGbCGDNIH6_RS05940Not AvailablePositive1298016 - 129958457276.1
tyrosine-type recombinase/integraseGbCGDNIH6_RS05945Not AvailablePositive1299891 - 130109945897.1
replication protein c, incq-typeGbCGDNIH6_RS05950Not AvailableNegative1301124 - 130197831684.4
helicase repa family proteinGbCGDNIH6_RS05955Not AvailableNegative1301965 - 130283731286.3
helix-turn-helix transcriptional regulatorGbCGDNIH6_RS05960Not AvailableNegative1302898 - 13030746672.14

Displaying genes 1221 – 1230 of 2444 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.