Granulibacter bethesdensis str. NIH6.1

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Granulibacter

Description

Granulibacter bethesdensis strain NIH6.1 is a Gram-negative, rod-shaped bacterium that has been isolated from a variety of habitats. This microbe exhibits characteristics typical of its genus, contributing to its classification within the broader context of bacterial diversity. The Gram-negative nature of G. bethesdensis suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a role in its environmental adaptability and interactions with other microorganisms. The versatile habitat of Granulibacter bethesdensis indicates its potential for niche specialization, allowing it to thrive in diverse environments. Such adaptability may be linked to specific metabolic capabilities or symbiotic relationships with other microbial or host organisms. As research continues, understanding the physiological and ecological roles of G. bethesdensis in its various habitats could provide insights into its interactions within microbial communities and its responses to environmental changes. Overall, the presence of Granulibacter bethesdensis str. NIH6.1 across multiple habitats highlights the significance of this bacterium in ecological research and its potential contributions to microbial diversity and ecosystem functioning. Further investigation into its metabolic pathways and interactions may reveal novel biological functions that underscore its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusGranulibacter
SpeciesGranulibacter bethesdensis
StrainNIH6.1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Granulibacter bethesdensis str. NIH6.1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Granulibacter bethesdensis strain NIH6.1 chromosome, complete

Gene Summary

Adenine Count

559780 bp

Thymine Count

555538 bp

Guanine Count

785610 bp

Cytosine Count

789813 bp

Genome Length

2690741 bp

Protein-coding Genes

2359 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan-associated lipoprotein palGbCGDNIH6_RS05720Not AvailablePositive1245549 - 124602516685.2
tetratricopeptide repeat proteinGbCGDNIH6_RS05725Not AvailablePositive1246146 - 124700330326.0
trna lysidine(34) synthetase tilsGbCGDNIH6_RS05730Not AvailablePositive1246990 - 124829147326.1
atp-dependent zinc metalloprotease ftshGbCGDNIH6_RS05735Not AvailablePositive1248441 - 125036670016.4
dihydropteroate synthaseGbCGDNIH6_RS05740Not AvailablePositive1250376 - 125142236952.6
phosphoglucosamine mutaseGbCGDNIH6_RS05745Not AvailablePositive1251477 - 125285048835.6
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseGbCGDNIH6_RS05750Not AvailablePositive1252847 - 125366828377.5
alpha/beta hydrolase family esteraseGbCGDNIH6_RS05755Not AvailableNegative1253682 - 125451829903.1
hypothetical proteinGbCGDNIH6_RS05760Not AvailableNegative1254706 - 125518517310.8
xanthine phosphoribosyltransferaseGbCGDNIH6_RS05765Not AvailableNegative1255185 - 125565517449.9

Displaying genes 1181 – 1190 of 2444 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.