Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Comamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Comamonas |
| Species | Comamonas thiooxydans |
| Strain | JC12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge; human gut; human intestinal tract |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1038351 bp
Thymine Count
1043597 bp
Guanine Count
1636728 bp
Cytosine Count
1638467 bp
Genome Length
5357143 bp
Protein-coding Genes
4888 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | P368_12880 | Not Available | Positive | 2786825 - 2787868 | 36768.8 |
| rod shape-determining protein mrec | P368_12885 | Not Available | Positive | 2788034 - 2789059 | 36893.1 |
| rod shape-determining protein mred | P368_12890 | Not Available | Positive | 2789056 - 2789574 | 18895.1 |
| penicillin-binding protein 2 | P368_12895 | Not Available | Positive | 2789697 - 2791649 | 71361.2 |
| membrane protein | P368_12900 | Not Available | Negative | 2791686 - 2792444 | 26940.5 |
| choline dehydrogenase | P368_12905 | Not Available | Negative | 2793019 - 2794686 | 61258.7 |
| abc transporter permease | P368_12910 | Not Available | Positive | 2795062 - 2796126 | 38470.0 |
| iron abc transporter atp-binding protein | P368_12915 | Not Available | Positive | 2796265 - 2797113 | 30461.0 |
| mammalian cell entry protein | P368_12920 | Not Available | Positive | 2797113 - 2798060 | 33089.6 |
| hypothetical protein | P368_12925 | Not Available | Positive | 2798212 - 2798850 | 22376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacteremia | Causes | PMC13579767 |
| Peritonitis | Causes | PMC13579767 |
| Wound infections | Causes | PMC13579767 |
