Mycobacterium ulcerans Agy99

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

In 1948 the etiologic agent of the Bairnsdale ulcer in humans was discovered by a team of Australian researchers and was named Mycobacterium ulcerans. During the 1960s many cases were reported from the Buruli County in Uganda and the disease became generally known as Buruli ulcer. The Buruli ulcer is a devastating necrotic disease of subcutaneous tissue and a single Buruli ulcer can cover more than 15% of a person's skin surface and contains huge numbers of extracellular bacteria. Despite their abundance and extensive tissue damage, there is no acute inflammatory response to the bacteria and the lesions are often painless. This pathology is attributed to mycolactone, a macrolide toxin. Impoverished rural communities of West and Central Africa are worst affected although the disease occurs in other parts of the world. Since 1989, the prevalence of Buruli ulcer has increased and now exceeds that of leprosy and, in some instances, tuberculosis. Outbreaks are sporadic and unpredictable. Although the epidemiology of Buruli ulcer is poorly understood, proximity to stagnant or slow-flowing watercourses is a recognized risk factor. M. ulcerans is associated with algae, therefore, snails and organisms that feed on algae could be passive hosts. It has been shown that M. ulcerans is able to multiply in the salivary glands of Naucoris cimicoides, a carnivorous water bug. Humans could become infected through contact with contaminated Naucorides. Mycobacterium ulcerans (strain Agy99) was isolated from an ulcerative lesion on the right elbow of a female patient from the Ga district of Ghana in 1999. Its genome is made up of a 5.6 Mb chromosome and a 174,155-bp plasmid. The chromosome contains 4160 CDS and 771 pseudogenes, it harbors two prophages, phiMU01 and phiMU02, 302 insertion sequence elements and multiple DNA deletions and rearrangements. This indicates that M. ulcerans has recently evolved via lateral gene transfer and reductive evolution from the generalist, more rapid-growing environmental Mycobacterium marinum to become a niche-adapted specialist. The virulence plasmid pMUM001 encodes 81 CDS. Six CDS code for proteins involved in mycolactone synthesis, among which, mlsA1 and mlsA2, two giant polyketide synthases (PKS) responsible for the synthesis of the mycolactone core, and mlsB which is responsible for the synthesis of the mycolactone side chain. (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium ulcerans
StrainAgy99

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Mycobacterium ulcerans Agy99
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Mycobacterium ulcerans Agy99


Gene Summary

Adenine Count

30741 bp

Thymine Count

34099 bp

Guanine Count

60035 bp

Cytosine Count

49280 bp

Genome Length

174155 bp

Protein-coding Genes

56 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive26962 - 27000Not Available
Transposase, putativeMUL_RS00155Not AvailableNegative26980 - 2828147127.2
TransposaseMUL_RS00160Not AvailableNegative28386 - 2972049174.5
hypothetical proteinMUL_RS27460Not AvailableNegative29668 - 2999712027.2
Beta-ketoacyl-acp synthase iMUL_RS00170Not AvailableNegative30054 - 724041496210.0
TransposaseMUL_RS00175Not AvailableNegative72635 - 727815788.04
Is1477 transposaseMUL_RS30360Not AvailableNegative73102 - 732967788.07
Hypothetical proteinMUL_RS30365Not AvailableNegative73368 - 735416422.72
hypothetical proteinMUL_RS26210Not AvailableNegative73729 - 738695168.39
transposaseMUL_RS27965Not AvailablePositive74171 - 7485124112.7

Displaying genes 1 – 10 of 5238 in total

Metabolites

134 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001369peroxynitriteNO3Chemical structure of peroxynitrite19059-14-4
Average62.0049Da
Monoisotopic61.987817871Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 134 metabolites

Health Effects

No health effects information available for this bacterium.