Acidovorax sp. KKS102

Gram-negativeBacilliNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax sp. KKS102 is a Gram-negative bacterium known for its remarkable capacity to degrade hydrocarbons, making it a notable member of the microbial community in soil environments. As a chemoheterotroph, Acidovorax sp. KKS102 utilizes organic compounds as both carbon and energy sources, allowing it to thrive in nutrient-rich soil conditions, particularly in areas contaminated with organic pollutants.This microbe is nonsporulating, which indicates that it does not form spores to withstand harsh conditions, but instead relies on its metabolic versatility to navigate environmental changes. Although specific details regarding its optimal temperature and oxygen requirements remain unspecified, its ecological niche suggests it is well adapted to the fluctuating conditions often found in soil habitats. The ability of Acidovorax sp. KKS102 to break down hydrocarbons positions it as a potential agent for bioremediation, a process that harnesses microbial metabolism to clean up contaminated environments. Its presence in soils tainted with petroleum and other hydrocarbons may facilitate the restoration of these ecosystems, promoting a healthier balance of soil microbiota and enhancing soil quality. By participating in the degradation of environmental pollutants, Acidovorax sp. KKS102 not only contributes to soil health but also underscores the indispensable role of soil microbiomes in ecological resilience and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax sp. KKS102
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax sp. KKS102
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Acidovorax sp. KKS102, complete sequence.

Gene Summary

Adenine Count

913248 bp

Thymine Count

909914 bp

Guanine Count

1688808 bp

Cytosine Count

1684965 bp

Genome Length

5196935 bp

Protein-coding Genes

4747 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isocitrate lyaseC380_RS14225P51066Negative3114960 - 311629148553.2
gamma-glutamylcyclotransferaseC380_RS14230Not AvailableNegative3116544 - 311696915197.2
dmt family transporterC380_RS14235Not AvailablePositive3117063 - 311797732394.7
ribonuclease e activity regulator rraaC380_RS14240Q21X23Negative3117993 - 311850517558.0
swib/mdm2 domain-containing proteinC380_RS14245Q08747Positive3118813 - 311913311162.8
tonb-dependent siderophore receptorC380_RS14250Q01674Positive3119404 - 312162681136.8
fe2+-dependent dioxygenaseC380_RS14255C5CUN1Positive3121693 - 312238525603.6
alpha-hydroxy acid oxidaseC380_RS14260B7RR92Positive3122504 - 312364639416.5
bacterioferritin-associated ferredoxinC380_RS14265Not AvailablePositive3123783 - 31240559588.33
energy transducer tonbC380_RS14270Not AvailablePositive3124160 - 312485824086.4

Displaying genes 2961 – 2970 of 4887 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

314 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da

Displaying 1–10 of 314 metabolites

Health Effects

No health effects information available for this bacterium.