Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclically-permuted mutarotase family protein | DWW04_02130 | Not Available | Negative | 438002 - 439129 | 40373.4 |
| beta-n-acetylhexosaminidase | DWW04_02135 | Not Available | Negative | 439224 - 441548 | 86818.1 |
| glycoside hydrolase family 2 protein | DWW04_02140 | Not Available | Negative | 441565 - 444132 | 98603.6 |
| sialate o-acetylesterase | DWW04_02145 | Not Available | Negative | 444159 - 446222 | 77803.5 |
| sialate o-acetylesterase | DWW04_02150 | Not Available | Negative | 446219 - 446884 | 25163.9 |
| beta-n-acetylhexosaminidase | DWW04_02155 | Not Available | Negative | 446886 - 448892 | 77011.4 |
| sialidase | DWW04_02160 | Not Available | Negative | 448896 - 450536 | 60343.4 |
| susd family outer membrane lipoprotein nanu | DWW04_02165 | Not Available | Negative | 450669 - 452171 | 56882.2 |
| tonb-dependent receptor | DWW04_02170 | Not Available | Negative | 452191 - 455466 | 121755.0 |
| Trna-arg | Not Available | Not Available | Positive | 455774 - 455848 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

