Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endolytic transglycosylase mltg | DWW04_01720 | Not Available | Positive | 335993 - 337027 | 39489.9 |
| 4fe-4s ferredoxin | DWW04_01725 | Not Available | Negative | 337252 - 338019 | 28986.9 |
| 50s ribosomal protein l20 | DWW04_01730 | Not Available | Negative | 338486 - 338836 | 13209.4 |
| 50s ribosomal protein l35 | DWW04_01735 | Not Available | Negative | 338948 - 339145 | 7367.31 |
| translation initiation factor if-3 | DWW04_01740 | Not Available | Negative | 339217 - 339813 | 22653.5 |
| threonine--trna ligase | DWW04_01745 | Not Available | Negative | 339929 - 341869 | 74203.2 |
| tetratricopeptide repeat protein | DWW04_01750 | Not Available | Negative | 341950 - 343959 | 77324.5 |
| peptide deformylase | DWW04_01755 | Not Available | Negative | 344033 - 344587 | 21064.7 |
| holliday junction resolvase ruvx | DWW04_01760 | Not Available | Negative | 344611 - 345030 | 15901.5 |
| hypothetical protein | DWW04_01765 | Not Available | Positive | 345236 - 346474 | 47719.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

