Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp family atp-binding protein | DWW04_16210 | Not Available | Negative | 3957032 - 3958132 | 39675.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DWW04_16215 | Not Available | Negative | 3958143 - 3958901 | 29773.6 |
| duf975 family protein | DWW04_16220 | Not Available | Negative | 3959024 - 3959650 | 23245.0 |
| branched-chain amino acid aminotransferase | DWW04_16225 | Not Available | Negative | 3959668 - 3960687 | 37876.2 |
| exodeoxyribonuclease vii small subunit | DWW04_16230 | Not Available | Negative | 3960868 - 3961071 | 7823.46 |
| exodeoxyribonuclease vii large subunit | DWW04_16235 | Not Available | Negative | 3961080 - 3962387 | 49535.8 |
| serine protease | DWW04_16240 | Not Available | Negative | 3962387 - 3963760 | 49946.9 |
| mate family efflux transporter | DWW04_16245 | Not Available | Positive | 3963882 - 3965252 | 49490.1 |
| cytidylate kinase-like family protein | DWW04_16250 | Not Available | Positive | 3965306 - 3965935 | 23564.2 |
| tetratricopeptide repeat protein | DWW04_16255 | Not Available | Positive | 3966165 - 3968021 | 72925.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

