Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_16160 | Not Available | Positive | 3945086 - 3946870 | 65156.6 |
| malate dehydrogenase | DWW04_16165 | Not Available | Negative | 3946968 - 3947909 | 32849.0 |
| hypothetical protein | DWW04_16170 | Not Available | Positive | 3948066 - 3948938 | 33451.4 |
| tolc family protein | DWW04_16175 | Not Available | Positive | 3949153 - 3950616 | 53434.7 |
| biotin/lipoyl-binding protein | DWW04_16180 | Not Available | Positive | 3950643 - 3951629 | 35945.9 |
| abc transporter permease | DWW04_16185 | Not Available | Positive | 3951636 - 3952811 | 44227.0 |
| abc transporter permease | DWW04_16190 | Not Available | Positive | 3952826 - 3954076 | 47511.7 |
| copper homeostasis protein | DWW04_16195 | Not Available | Positive | 3954112 - 3954540 | 15858.6 |
| blai/meci/copy family transcriptional regulator | DWW04_16200 | Not Available | Positive | 3954726 - 3955091 | 14087.0 |
| tonb family protein | DWW04_16205 | Not Available | Positive | 3955114 - 3956964 | 69497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

