Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_16055 | Not Available | Negative | 3915437 - 3915730 | 11210.5 |
| acrb/acrd/acrf family protein | DWW04_16060 | Not Available | Negative | 3915803 - 3918973 | 115730.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWW04_16065 | Not Available | Negative | 3919062 - 3920084 | 37621.8 |
| tolc family protein | DWW04_16070 | Not Available | Negative | 3920108 - 3921433 | 49677.7 |
| tetr/acrr family transcriptional regulator | DWW04_16075 | Not Available | Negative | 3921470 - 3922123 | 25455.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWW04_16080 | Not Available | Negative | 3922153 - 3922920 | 27567.0 |
| tolc family protein | DWW04_16085 | Not Available | Negative | 3922944 - 3924329 | 50367.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWW04_16090 | Not Available | Negative | 3924341 - 3927559 | 116974.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWW04_16095 | Not Available | Negative | 3927609 - 3928820 | 43713.5 |
| nadp-dependent malic enzyme | DWW04_16100 | Not Available | Positive | 3929270 - 3931555 | 84210.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

