Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_15950 | Not Available | Negative | 3887785 - 3891021 | 120067.0 |
| dead/deah box helicase | DWW04_15955 | Not Available | Negative | 3891687 - 3892991 | 48206.5 |
| hypothetical protein | DWW04_15960 | Not Available | Negative | 3893192 - 3895648 | 89584.3 |
| endonuclease/exonuclease/phosphatase family protein | DWW04_15965 | Not Available | Negative | 3895671 - 3896609 | 35213.0 |
| cysteine synthase a | DWW04_15970 | Not Available | Positive | 3896755 - 3897702 | 33419.5 |
| trna 2-thiouridine(34) synthase mnma | DWW04_15975 | Not Available | Positive | 3897712 - 3898776 | 39739.6 |
| dna-binding response regulator | DWW04_15980 | Not Available | Negative | 3898773 - 3899423 | 24825.4 |
| Trna-val | Not Available | Not Available | Positive | 3899491 - 3899568 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3899603 - 3899677 | Not Available |
| tryptophan--trna ligase | DWW04_15995 | Not Available | Negative | 3899891 - 3900985 | 41372.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

