Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DWW04_15900 | Not Available | Positive | 3873703 - 3876270 | 96888.2 |
| sigma-54-dependent fis family transcriptional regulator | DWW04_15905 | Not Available | Positive | 3876372 - 3877754 | 51219.5 |
| hypothetical protein | DWW04_15910 | Not Available | Positive | 3878041 - 3878346 | 10868.0 |
| rna pseudouridine synthase | DWW04_15915 | Not Available | Negative | 3878411 - 3879082 | 25416.7 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DWW04_15920 | Not Available | Negative | 3879084 - 3879830 | 25964.4 |
| tetr/acrr family transcriptional regulator | DWW04_15925 | Not Available | Negative | 3879862 - 3880461 | 22662.3 |
| Trna-met | Not Available | Not Available | Positive | 3880693 - 3880765 | Not Available |
| glycoside hydrolase family 2 protein | DWW04_15935 | Not Available | Positive | 3880868 - 3883546 | 101378.0 |
| duf1566 domain-containing protein | DWW04_15940 | Not Available | Positive | 3883733 - 3885283 | 55165.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_15945 | Not Available | Negative | 3885749 - 3887764 | 75955.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

