Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5060 domain-containing protein | DWW04_15845 | Not Available | Negative | 3853220 - 3854824 | 61924.9 |
| hybrid sensor histidine kinase/response regulator | DWW04_15850 | Not Available | Negative | 3854989 - 3859311 | 165155.0 |
| hypothetical protein | DWW04_15855 | Not Available | Negative | 3859525 - 3860205 | 24715.3 |
| arac family transcriptional regulator | DWW04_15860 | Not Available | Positive | 3860417 - 3861319 | 35287.9 |
| nucleotidyltransferase | DWW04_15865 | Not Available | Negative | 3861423 - 3862334 | 33769.1 |
| hypothetical protein | DWW04_15870 | Not Available | Negative | 3862469 - 3864826 | 88967.5 |
| hypothetical protein | DWW04_15875 | Not Available | Negative | 3864823 - 3869472 | 171769.0 |
| peptidylprolyl isomerase | DWW04_15885 | Not Available | Positive | 3870183 - 3871028 | 31477.6 |
| insulinase family protein | DWW04_15890 | Not Available | Positive | 3871041 - 3872285 | 47363.6 |
| mate family efflux transporter | DWW04_15895 | Not Available | Positive | 3872379 - 3873689 | 48593.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

