Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DWW04_15795 | Not Available | Positive | 3841442 - 3842632 | 43847.5 |
| histidine--trna ligase | DWW04_15800 | Not Available | Negative | 3843212 - 3844576 | 50329.7 |
| sugar abc transporter substrate-binding protein | DWW04_15805 | Not Available | Negative | 3844735 - 3845583 | 31277.0 |
| multidrug dmt transporter permease | DWW04_15810 | Not Available | Negative | 3845591 - 3846607 | 36037.9 |
| fucose isomerase | DWW04_15815 | Not Available | Negative | 3846620 - 3848044 | 52318.8 |
| glycerol kinase glpk | DWW04_15820 | Not Available | Negative | 3848078 - 3849574 | 55251.4 |
| transketolase family protein | DWW04_15825 | Not Available | Negative | 3849600 - 3850538 | 33639.6 |
| transketolase | DWW04_15830 | Not Available | Negative | 3850528 - 3851373 | 31469.7 |
| deor/glpr transcriptional regulator | DWW04_15835 | Not Available | Negative | 3851717 - 3852472 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DWW04_15840 | Not Available | Negative | 3852484 - 3853098 | 22216.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

