Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 109 protein 1 | DWW04_15745 | Not Available | Positive | 3830390 - 3831805 | 53451.8 |
| carbonic anhydrase | DWW04_15750 | Not Available | Negative | 3831930 - 3832469 | 19927.5 |
| crp/fnr family transcriptional regulator | DWW04_15755 | Not Available | Negative | 3832660 - 3833244 | 22223.6 |
| mate family efflux transporter | DWW04_15760 | Not Available | Negative | 3833280 - 3834632 | 49552.6 |
| Trna-thr | Not Available | Not Available | Positive | 3834785 - 3834858 | Not Available |
| molecular chaperone groel | DWW04_15770 | Not Available | Negative | 3835106 - 3836743 | 58147.1 |
| co-chaperone groes | DWW04_15775 | Not Available | Negative | 3836785 - 3837057 | 9740.92 |
| 4fe-4s dicluster domain-containing protein | DWW04_15780 | Not Available | Positive | 3837438 - 3838904 | 54223.4 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DWW04_15785 | Not Available | Positive | 3838913 - 3839947 | 38858.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DWW04_15790 | Not Available | Positive | 3839960 - 3841378 | 53347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

