Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DWW04_15695 | Not Available | Positive | 3820481 - 3821698 | 46274.2 |
| hypothetical protein | DWW04_15700 | Not Available | Positive | 3821777 - 3821962 | 7426.38 |
| urocanate hydratase | DWW04_15705 | Not Available | Positive | 3822224 - 3824221 | 74552.1 |
| formiminotransferase-cyclodeaminase | DWW04_15710 | Not Available | Positive | 3824243 - 3824356 | 4447.29 |
| glutamate formimidoyltransferase | DWW04_15715 | Not Available | Positive | 3824304 - 3825206 | 33346.4 |
| gxxexxy protein | DWW04_15720 | Not Available | Positive | 3825224 - 3825610 | 15150.3 |
| imidazolonepropionase | DWW04_15725 | Not Available | Positive | 3825657 - 3826901 | 44889.3 |
| methenyltetrahydrofolate cyclohydrolase | DWW04_15730 | Not Available | Positive | 3826922 - 3827545 | 22967.8 |
| histidine ammonia-lyase | DWW04_15735 | Not Available | Positive | 3827580 - 3829076 | 55180.9 |
| nudix domain-containing protein | DWW04_15740 | Not Available | Positive | 3829195 - 3829695 | 19013.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

