Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_15545 | Not Available | Negative | 3788304 - 3788426 | 4362.07 |
| isoaspartyl peptidase/l-asparaginase | DWW04_15550 | Not Available | Negative | 3788906 - 3789892 | 35029.3 |
| hypothetical protein | DWW04_15555 | Not Available | Negative | 3789889 - 3790107 | 8495.06 |
| l-rhamnose mutarotase | DWW04_15560 | Not Available | Negative | 3790600 - 3790989 | 15271.5 |
| rok family protein | DWW04_15565 | Not Available | Negative | 3790989 - 3791960 | 34285.3 |
| abc transporter atp-binding protein | DWW04_15570 | Not Available | Positive | 3792113 - 3792832 | 26742.3 |
| abc transporter permease | DWW04_15575 | Not Available | Positive | 3792842 - 3794098 | 46682.1 |
| abc transporter permease | DWW04_15580 | Not Available | Positive | 3794103 - 3795344 | 45548.9 |
| efflux rnd transporter periplasmic adaptor subunit | DWW04_15585 | Not Available | Positive | 3795418 - 3796512 | 40037.4 |
| tolc family protein | DWW04_15590 | Not Available | Positive | 3796525 - 3797856 | 49976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

