Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | DWW04_15495 | Not Available | Positive | 3770685 - 3771818 | 43937.2 |
| beta-galactosidase | DWW04_15500 | Not Available | Negative | 3771937 - 3774051 | 80971.2 |
| glycoside hydrolase | DWW04_15505 | Not Available | Negative | 3774030 - 3776384 | 89221.7 |
| beta-glucuronidase | DWW04_15510 | Not Available | Positive | 3776596 - 3779463 | 110005.0 |
| rhamnogalacturonan acetylesterase | DWW04_15515 | Not Available | Positive | 3779482 - 3780756 | 47830.4 |
| glycoside hydrolase family 28 protein | DWW04_15520 | Not Available | Positive | 3780774 - 3782258 | 54850.1 |
| duf4450 domain-containing protein | DWW04_15525 | Not Available | Positive | 3782236 - 3782934 | 26150.4 |
| hypothetical protein | DWW04_15530 | Not Available | Positive | 3782931 - 3783734 | 30969.2 |
| glycoside hydrolase family 28 protein | DWW04_15535 | Not Available | Positive | 3783750 - 3785177 | 52329.1 |
| glycosyl hydrolase family 2 | DWW04_15540 | Not Available | Positive | 3785190 - 3787952 | 104117.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

