Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | DWW04_15395 | Not Available | Negative | 3729994 - 3732849 | 106544.0 |
| duf4976 domain-containing protein | DWW04_15400 | Not Available | Negative | 3732863 - 3734257 | 51682.5 |
| oligogalacturonide lyase | DWW04_15405 | Not Available | Negative | 3734271 - 3735596 | 49992.5 |
| polysaccharide deacetylase family protein | DWW04_15410 | Not Available | Negative | 3735690 - 3736667 | 37263.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_15415 | Not Available | Negative | 3736925 - 3739237 | 86082.9 |
| tonb-dependent receptor | DWW04_15420 | Not Available | Negative | 3739261 - 3742626 | 124063.0 |
| recombinase | DWW04_15425 | Not Available | Negative | 3742997 - 3744178 | 45902.3 |
| tonb-dependent receptor | DWW04_15430 | Not Available | Positive | 3744467 - 3747649 | 118584.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_15435 | Not Available | Positive | 3747668 - 3749644 | 74989.4 |
| susc/raga family tonb-linked outer membrane protein | DWW04_15440 | Not Available | Positive | 3749685 - 3752534 | 106848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

