Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | DWW04_15340 | Not Available | Negative | 3707742 - 3709130 | 52177.9 |
| hypothetical protein | DWW04_15345 | Not Available | Negative | 3709194 - 3711545 | 89796.6 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_15350 | Not Available | Negative | 3711738 - 3713219 | 56670.1 |
| susc/raga family tonb-linked outer membrane protein | DWW04_15355 | Not Available | Negative | 3713232 - 3716558 | 124421.0 |
| duf4974 domain-containing protein | DWW04_15360 | Not Available | Negative | 3716790 - 3717806 | 39413.2 |
| rna polymerase sigma-70 factor | DWW04_15365 | Not Available | Positive | 3717943 - 3718524 | 23075.8 |
| hypothetical protein | DWW04_15375 | Not Available | Negative | 3719720 - 3723019 | 124981.0 |
| rhamnogalacturonan acetylesterase | DWW04_15380 | Not Available | Negative | 3723041 - 3724597 | 58049.5 |
| rhamnogalacturonan lyase | DWW04_15385 | Not Available | Negative | 3724832 - 3726658 | 66980.8 |
| duf4982 domain-containing protein | DWW04_15390 | Not Available | Negative | 3726783 - 3729788 | 114595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

