Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DWW04_15285 | Not Available | Positive | 3692365 - 3693558 | 43150.7 |
| 4fe-4s dicluster domain-containing protein | DWW04_15290 | Not Available | Negative | 3693737 - 3693904 | 5717.65 |
| bifunctional metallophosphatase/5'-nucleotidase | DWW04_15300 | Not Available | Negative | 3697046 - 3697888 | 31336.2 |
| 5'-nucleotidase | DWW04_15305 | Not Available | Negative | 3697900 - 3698679 | 27883.5 |
| 50s ribosomal protein l19 | DWW04_15310 | Not Available | Positive | 3698878 - 3699231 | 13130.2 |
| hypothetical protein | DWW04_15315 | Not Available | Positive | 3699385 - 3699603 | 7895.11 |
| hybrid sensor histidine kinase/response regulator | DWW04_15320 | Not Available | Negative | 3699691 - 3703977 | 162785.0 |
| l-rhamnose mutarotase | DWW04_15325 | Not Available | Negative | 3704059 - 3704373 | 12228.6 |
| glycoside hydrolase family 88 protein | DWW04_15330 | Not Available | Negative | 3704410 - 3705825 | 53246.8 |
| rhamnogalacturonan lyase | DWW04_15335 | Not Available | Negative | 3705838 - 3707745 | 70614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

