Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DWW04_15225 | Not Available | Positive | 3677039 - 3677947 | 35478.1 |
| hypothetical protein | DWW04_15230 | Not Available | Positive | 3678474 - 3681272 | 104558.0 |
| ompa family protein | DWW04_15235 | Not Available | Positive | 3681277 - 3682467 | 45179.7 |
| arac family transcriptional regulator | DWW04_15240 | Not Available | Positive | 3683509 - 3684330 | 31662.1 |
| chloramphenicol acetyltransferase | DWW04_15245 | Not Available | Positive | 3684411 - 3685034 | 23640.8 |
| Trna-met | Not Available | Not Available | Positive | 3688243 - 3688316 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3688375 - 3688451 | Not Available |
| hypothetical protein | DWW04_15270 | Not Available | Positive | 3688655 - 3689041 | 15243.1 |
| yjgp/yjgq family permease | DWW04_15275 | Not Available | Positive | 3689125 - 3691023 | 72574.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DWW04_15280 | Not Available | Positive | 3691026 - 3692240 | 44989.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

