Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_15175 | Not Available | Negative | 3658509 - 3660665 | 81338.9 |
| hypothetical protein | DWW04_15180 | Not Available | Negative | 3660679 - 3661341 | 24866.4 |
| hypothetical protein | DWW04_15185 | Not Available | Negative | 3661343 - 3661810 | 16072.3 |
| hypothetical protein | DWW04_15190 | Not Available | Positive | 3662045 - 3662347 | 11653.6 |
| hypothetical protein | DWW04_15195 | Not Available | Positive | 3662344 - 3663213 | 34034.8 |
| hybrid sensor histidine kinase/response regulator | DWW04_15200 | Not Available | Negative | 3663234 - 3667508 | 163156.0 |
| glycoside hydrolase family 2 protein | DWW04_15205 | Not Available | Negative | 3667570 - 3669906 | 89469.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_15210 | Not Available | Negative | 3670036 - 3671685 | 62837.9 |
| tonb-dependent receptor | DWW04_15215 | Not Available | Negative | 3671701 - 3674961 | 118534.0 |
| exopolygalacturonase | DWW04_15220 | Not Available | Positive | 3675366 - 3676703 | 50652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

