Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 3614144 - 3614217 | Not Available |
| capa family protein | DWW04_15030 | Not Available | Negative | 3614293 - 3615366 | 40995.7 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DWW04_15035 | Not Available | Negative | 3616304 - 3617185 | 31626.8 |
| signal recognition particle protein | DWW04_15040 | Not Available | Negative | 3617304 - 3618626 | 48898.8 |
| mate family efflux transporter | DWW04_15045 | Not Available | Negative | 3618725 - 3620047 | 48834.6 |
| hypothetical protein | DWW04_15050 | Not Available | Negative | 3620147 - 3620395 | 9652.1 |
| hypothetical protein | DWW04_15055 | Not Available | Positive | 3620652 - 3622019 | 49212.4 |
| rna polymerase sigma-70 factor | DWW04_15060 | Not Available | Negative | 3622080 - 3622640 | 21939.5 |
| duf1624 domain-containing protein | DWW04_15065 | Not Available | Negative | 3622665 - 3623756 | 40528.5 |
| beta-hexosaminidase | DWW04_15070 | Not Available | Positive | 3623957 - 3626380 | 90760.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

