Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_14975 | Not Available | Negative | 3593790 - 3596789 | 112122.0 |
| hybrid sensor histidine kinase/response regulator | DWW04_14980 | Not Available | Negative | 3597106 - 3601056 | 152136.0 |
| galactose mutarotase | DWW04_14985 | Not Available | Negative | 3601239 - 3602372 | 42553.4 |
| beta-galactosidase | DWW04_14990 | Not Available | Negative | 3602378 - 3604192 | 69216.2 |
| ahpc/tsa family protein | DWW04_14995 | Not Available | Negative | 3604810 - 3605988 | 44813.2 |
| tlpa family protein disulfide reductase | DWW04_15000 | Not Available | Negative | 3605996 - 3607372 | 51186.2 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_15005 | Not Available | Negative | 3607384 - 3608775 | 53222.6 |
| susc/raga family tonb-linked outer membrane protein | DWW04_15010 | Not Available | Negative | 3608794 - 3612288 | 130523.0 |
| fecr family protein | DWW04_15015 | Not Available | Negative | 3612346 - 3613425 | 41346.0 |
| sigma-70 family rna polymerase sigma factor | DWW04_15020 | Not Available | Negative | 3613498 - 3614064 | 22678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

