Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | DWW04_14925 | Not Available | Positive | 3579955 - 3580989 | 38993.7 |
| mfs transporter | DWW04_14930 | Not Available | Positive | 3581117 - 3582313 | 43901.7 |
| hypothetical protein | DWW04_14935 | Not Available | Negative | 3582310 - 3583452 | 43053.4 |
| 4-amino-4-deoxychorismate lyase | DWW04_14940 | Not Available | Negative | 3583542 - 3584135 | 22676.3 |
| aminodeoxychorismate synthase component i | DWW04_14945 | Not Available | Negative | 3584119 - 3585102 | 37387.9 |
| hypothetical protein | DWW04_14950 | Not Available | Negative | 3585438 - 3587471 | 77655.4 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW04_14955 | Not Available | Negative | 3587491 - 3588492 | 37429.0 |
| 1,4-beta-xylanase | DWW04_14960 | Not Available | Negative | 3588489 - 3589457 | 37023.1 |
| glycoside hydrolase | DWW04_14965 | Not Available | Negative | 3589466 - 3592099 | 101204.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_14970 | Not Available | Negative | 3592179 - 3593768 | 61771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

