Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DWW04_14875 | Not Available | Negative | 3570868 - 3571323 | 17749.2 |
| 7-cyano-7-deazaguanine synthase quec | DWW04_14880 | Not Available | Negative | 3571543 - 3572214 | 24845.8 |
| vut family protein | DWW04_14885 | Not Available | Negative | 3572327 - 3573013 | 25069.6 |
| ornithine--oxo-acid transaminase | DWW04_14890 | Not Available | Negative | 3573312 - 3574547 | 45621.9 |
| amidinotransferase | DWW04_14895 | Not Available | Negative | 3574562 - 3575473 | 34343.1 |
| amidinotransferase | DWW04_14900 | Not Available | Negative | 3575496 - 3576416 | 35512.7 |
| endonuclease iii | DWW04_14905 | Not Available | Positive | 3576534 - 3577178 | 24159.7 |
| mbl fold metallo-hydrolase | DWW04_14910 | Not Available | Negative | 3577173 - 3577949 | 29091.4 |
| udp-n-acetylmuramate dehydrogenase | DWW04_14915 | Not Available | Negative | 3577958 - 3578971 | 37619.1 |
| duf4348 domain-containing protein | DWW04_14920 | Not Available | Negative | 3578983 - 3579843 | 33490.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

