Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | DWW04_14825 | Not Available | Positive | 3561310 - 3563538 | 83942.1 |
| pyruvate formate lyase-activating protein | DWW04_14830 | Not Available | Positive | 3563607 - 3564335 | 27916.5 |
| hypothetical protein | DWW04_14835 | Not Available | Positive | 3564437 - 3565186 | 26787.2 |
| hypothetical protein | DWW04_14840 | Not Available | Negative | 3565265 - 3565852 | 21676.2 |
| lactate utilization protein | DWW04_14845 | Not Available | Negative | 3565855 - 3567222 | 51683.6 |
| (fe-s)-binding protein | DWW04_14850 | Not Available | Negative | 3567219 - 3567959 | 27306.1 |
| dna-binding response regulator | DWW04_14855 | Not Available | Negative | 3568271 - 3568882 | 22695.7 |
| hemerythrin domain-containing protein | DWW04_14860 | Not Available | Negative | 3568879 - 3569574 | 26970.4 |
| tryptophan-rich sensory protein | DWW04_14865 | Not Available | Negative | 3569701 - 3570165 | 18041.9 |
| Trna-ser | Not Available | Not Available | Positive | 3570693 - 3570780 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

