Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_14615 | Not Available | Negative | 3500934 - 3502709 | 67441.7 |
| tonb-dependent receptor | DWW04_14620 | Not Available | Negative | 3502733 - 3505891 | 116600.0 |
| hypothetical protein | DWW04_14625 | Not Available | Negative | 3506010 - 3506168 | 6014.39 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_14630 | Not Available | Negative | 3506363 - 3508333 | 73758.2 |
| tonb-dependent receptor | DWW04_14635 | Not Available | Negative | 3508357 - 3511560 | 118395.0 |
| hypothetical protein | DWW04_14640 | Not Available | Negative | 3511595 - 3511879 | 11160.2 |
| sigma-70 family rna polymerase sigma factor | DWW04_14645 | Not Available | Negative | 3511928 - 3512482 | 21450.0 |
| pectate lyase | DWW04_14650 | Not Available | Negative | 3512669 - 3515755 | 115817.0 |
| polysaccharide lyase | DWW04_14655 | Not Available | Negative | 3515757 - 3517439 | 61355.8 |
| duf3826 domain-containing protein | DWW04_14660 | Not Available | Negative | 3517639 - 3518307 | 25127.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

