Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | DWW04_14360 | Not Available | Negative | 3448006 - 3449514 | 56454.8 |
| 3-isopropylmalate dehydratase small subunit | DWW04_14365 | Not Available | Negative | 3449520 - 3450116 | 22389.5 |
| 3-isopropylmalate dehydratase large subunit | DWW04_14370 | Not Available | Negative | 3450130 - 3451512 | 50069.1 |
| 2-isopropylmalate synthase | DWW04_14375 | Not Available | Negative | 3451524 - 3453020 | 54450.0 |
| atp-dependent helicase | DWW04_14380 | Not Available | Negative | 3453634 - 3453857 | 8781.7 |
| hepn domain-containing protein | DWW04_14385 | Not Available | Negative | 3453961 - 3454362 | 15666.6 |
| nucleotidyltransferase domain-containing protein | DWW04_14390 | Not Available | Negative | 3454359 - 3454667 | 11591.2 |
| aaa family atpase | DWW04_14395 | Not Available | Negative | 3454850 - 3456418 | 60044.6 |
| duf86 domain-containing protein | DWW04_14400 | Not Available | Negative | 3456543 - 3456935 | 15191.7 |
| dna polymerase subunit beta | DWW04_14405 | Not Available | Negative | 3456928 - 3457221 | 11114.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

